Stem-loop ggo-mir-29b-1

Accession

MI0002728

Description

Gorilla gorilla ggo-mir-29b-1 precursor miRNA

Sequence

cuucaggaagcugguuucauauggugguuuagauuuaaauagugauugucUAGCACCAUUUGAAAUCAGUguucuuggggg
(((((((((((((((((((.((((((..((((((.............)))))))))))).)))))))))).))))))))).

Structure

-         -          u      gu      uuaaa 
 cuucaggaa gcugguuuca auggug  uuagau     u
 ||||||||| |||||||||| ||||||  ||||||     a
 gggguucuu UGACUAAAGU UACCAC  GAUcug     g
g         g          U      --      uuagu 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr7: 130189494-130189574 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-29b-1

Mature ggo-miR-29b

• Accession: MIMAT0002436
• Description: Gorilla gorilla ggo-miR-29b mature miRNA
• Sequence: 51 - UAGCACCAUUUGAAAUCAGU - 70
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24