miRBase entry: ppa-mir-147

Stem-loop ppa-mir-147


Accession
MI0002774
Description
Pan paniscus ppa-mir-147 precursor miRNA


Sequence


aaucuaaagaaaacauuucugcacacacaccagacuauggaagccaGUGUGUGGAAAUGCUUCUGCuagauu
((((((.((((..(((((((((((((...(((.....)))......))))))))))))).))))..))))))

Structure
      -a    aa             ---aca   g 
aaucua  agaa  cauuucugcacac      cca a
||||||  ||||  |||||||||||||      ||| c
uuagau  UCUU  GUAAAGGUGUGUG      ggu u
      CG    -C             accgaa   a 


Annotation confidence Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr9: 119718166-119718237 [-]

Database links

Mature ppa-miR-147

Accession MIMAT0002478
Description Pan paniscus ppa-miR-147 mature miRNA
Sequence 47 - GUGUGUGGAAAUGCUUCUGC - 66
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24