Stem-loop ggo-mir-10b

Accession

MI0002793

Description

Gorilla gorilla ggo-mir-10b precursor miRNA

Literature search

1 open access papers mention ggo-mir-10b
(7 sentences)

Sequence

ccagacauuguaacguugucuauauaUACCCUGUAGAACCGAAUUUGUgugguauccauauagucacagauucgauucuaggggaauauauggucgaugcaaaaacuuca
.............(((((.((((((((.((((.(((((.((((((((((.(.(((....))).))))))))))).))))))))).)))))))).)))))...........

Structure

ccagacauuguaa     u        A    G     C          u g   c 
             cguug cuauauaU CCCU UAGAA CGAAUUUGUg g uau c
             ||||| |||||||| |||| ||||| |||||||||| | |||  
             guagc gguauaua gggg aucuu gcuuagacac u aua a
--acuucaaaaac     u        a    -     a          - g   u 

Annotation confidence Low

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr2B: 68564274-68564383 [+]

Mature ggo-miR-10b

• Accession: MIMAT0002491
• Description: Gorilla gorilla ggo-miR-10b mature miRNA
• Sequence: 27 - UACCCUGUAGAACCGAAUUUGU - 48
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24