Stem-loop ppa-mir-181a-2

Accession

MI0002806

Description

Pan paniscus ppa-mir-181a-2 precursor miRNA

Sequence

agaagggcuaucaggccagccuucagaggacuccaaggAACAUUCAACGCUGUCGGUGAGUuugggauuugaaaaaaccacugaccguugacuguaccuugggguccuua
.((((((((....)))...))))).(((((((((((((.(((.((((((..(((((((.((((...........))))))))))))))))).))).))))))))))))).

Structure

agaagggcuaucaggccagccuuca             A   U      CU       A    ggga 
                         gaggacuccaagg ACA UCAACG  GUCGGUG GUuu    u
                         ||||||||||||| ||| ||||||  ||||||| ||||    u
                         uuccugggguucc ugu aguugc  cagucac caaa    u
------------------------a             a   c      --       -    aaag 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr9: 124334867-124334976 [+]

Mature ppa-miR-181a-5p

• Accession: MIMAT0002504
• Description: Pan paniscus ppa-miR-181a-5p mature miRNA
• Sequence: 39 - AACAUUCAACGCUGUCGGUGAGU - 61
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24