Accession
MI0002813
Description
Gorilla gorilla
ggo-mir-181c precursor miRNA
Sequence
1578
reads,
129.0
reads per million, 4 experiments
cggaaaauuugccaaggguuugggggAACAUUCAACCUGUCGGUGAGUUUgggcagcucaggcaaACCAUCGACCGUUGAGUGGACccugaggccuggaauugccauccu
.(((.......(((..(((((.((((..((((((((..(((((((.(((((...........)))))))))))).))))))))..)))).))))))))........))).
.(((.......(((..(((((.((((..((((((((..(((((((.(((((...........)))))))))))).))))))))..)))).))))))))........))).
Structure
c -aaauuug ag g AA CU A ggca gga cca gguuu gggg CAUUCAAC GUCGGUG GUUUg g ||| ||| ||||| |||| |||||||| ||||||| ||||| c ccu ggu ccgga uccC GUGAGUUG CAGCUAC CAaac u u accguuaa -- g AG -C - ggac
Annotation confidence
High
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr19: 13651895-13652004 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ggo-mir-181c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ggo-miR-181c-5p
| Accession | MIMAT0002511 |
| Description | Gorilla gorilla ggo-miR-181c-5p mature miRNA |
| Sequence | 27 - AACAUUCAACCUGUCGGUGAGUUU - 50 |
| Evidence | not_experimental |
Mature ggo-miR-181c-3p
| Accession | MIMAT0061264 |
| Description | Gorilla gorilla ggo-miR-181c-3p mature miRNA |
| Sequence | 66 - ACCAUCGACCGUUGAGUGGAC - 86 |
| Evidence | experimental |
References
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