miRBase entry: ggo-mir-187

Stem-loop ggo-mir-187


Accession
MI0002817
Description
Gorilla gorilla ggo-mir-187 precursor miRNA


Sequence


ggucgggcucaccaugacacagugugagaccucgggcuacaacacaggacccgggcgcugcucugaccccUCGUGUCUUGUGUUGCAGCCGgagggacgcagguccgca
.(.((((((.............((((...((((.((((.(((((((((((.((((.((......).).)).)).))))))))))).)))).))))..))))))))))).

Structure
g u      caccaugacacag    aga    g    a           c  -  c - ug 
 g cgggcu             ugug   ccuc ggcu caacacaggac cg gg g c  c
 | ||||||             ||||   |||| |||| ||||||||||| || || | |   
 c gccugg             acgc   ggag CCGA GUUGUGUUCUG GC cc c g  u
a -      -------------    -ag    G    C           U  U  c a uc 


Annotation confidence Low
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr18: 32747923-32748031 [-]

Database links

Mature ggo-miR-187

Accession MIMAT0002515
Description Gorilla gorilla ggo-miR-187 mature miRNA
Sequence 71 - UCGUGUCUUGUGUUGCAGCCG - 91
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24