miRBase entry: age-mir-196

Stem-loop age-mir-196


Accession
MI0002828
Description
Ateles geoffroyi age-mir-196 precursor miRNA


Sequence

ugcuugcucagcugaucuguggcuUAGGUAGUUUCAUGUUGUUGGGauugaguuuugaacucggcaacaagaaacugccugaguuacaucagucgguuuucgucgagggg
(.(((((..(((((((.((((((((((((((((((.((((((((((.((........)))))))))))).))))))))))))))))))...)))))))...).)))).).

Structure
- g    - -uc       --c                  A          a  gag 
 u cuug c   agcugau   uguggcuUAGGUAGUUUC UGUUGUUGGG uu   u
 | |||| |   |||||||   |||||||||||||||||| |||||||||| ||    
 g gagc g   uuggcug   acauugaguccgucaaag acaacggcuc aa   u
g g    u cuu       acu                  a          -  guu 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature age-miR-196

Accession MIMAT0002525
Description Ateles geoffroyi age-miR-196 mature miRNA
Sequence 25 - UAGGUAGUUUCAUGUUGUUGGG - 46
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24