Stem-loop lla-mir-199a

Accession

MI0002836

Description

Lagothrix lagotricha lla-mir-199a precursor miRNA

Sequence

aggaagcuucuggagauccugcuccgucgcCCCAGUGUUCAGACUACCUGUUCaggacaaugccguuguacaguagucugcacauugguuagacugggcaagggagaaca
.......((((.....((((((((.(((...(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))...))).)))).))))))))..

Structure

aggaagc    ggaga    -    c   gcC       U        C   U  --  ac 
       uucu     uccu gcuc guc   CCAGUGU CAGACUAC UGU Ca  gg  a
       ||||     |||| |||| |||   ||||||| |||||||| ||| ||  ||   
       aaga     ggga cggg cag   gguuaca gucugaug aca gu  cc  a
-----ac    -----    a    u   auu       c        -   u  ug  gu 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lla-miR-199a

• Accession: MIMAT0002533
• Description: Lagothrix lagotricha lla-miR-199a mature miRNA
• Sequence: 31 - CCCAGUGUUCAGACUACCUGUUC - 53
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24