Stem-loop mml-mir-211

Accession

MI0002850

Description

Macaca mulatta mml-mir-211 precursor miRNA

Literature search

2 open access papers mention mml-mir-211
(4 sentences)

Sequence

13794 reads, 28.0 reads per million, 109 experiments

ucacuggccaugugacuugugggcUUCCCUUUGUCAUCCUUUGCCUagggcucugagcaggGCAGGGACAGCAAAGGGGUGcucaguugucacuucccacagcacagag
...(((.....(((((...(((((.(((((((((..(((((.((((...(((...))).)))))))))..))))))))).)))))...)))))......))).......

Structure

----uca   -gccau     uug     U         CA     U    agg   c 
       cug      gugac   ugggc UCCCUUUGU  UCCUU GCCU   gcu  
       |||      |||||   ||||| |||||||||  ||||| ||||   ||| u
       gac      cacug   acucG GGGGAAACG  AGGGA CGgg   cga  
gagacac   acccuu     uug     U         AC     -    --a   g 

Annotation confidence High

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

7: 7187317-7187425 [+]

Mature mml-miR-211-5p

• Accession: MIMAT0002547
• Description: Macaca mulatta mml-miR-211-5p mature miRNA
• Sequence: 25 - UUCCCUUUGUCAUCCUUUGCCU - 46
• Evidence: not_experimental

Mature mml-miR-211-3p

• Accession: MIMAT0051607
• Description: Macaca mulatta mml-miR-211-3p mature miRNA
• Sequence: 62 - GCAGGGACAGCAAAGGGGUG - 81
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24