miRBase entry: lca-mir-218

Stem-loop lca-mir-218


Accession
MI0002871
Description
Lemur catta lca-mir-218 precursor miRNA


Sequence


gugauaauguagcgagauuuucugUUGUGCUUGAUCUAACCAUGUgguugccagguaugaguaaaacaugguuccgucaagcaccauggaacgucacgcagcuuucuaca
(((..((.((.(((.(((.((((((.(((((((((..((((((((..((((((....)).)))).))))))))..))))))))).)))))).))).))).))))..))).

Structure
-   au  u  a   a   u      U         CU        gg    -  g 
 gug  aa gu gcg gau uucugU GUGCUUGAU  AACCAUGU  uugc ca g
 |||  || || ||| ||| |||||| |||||||||  ||||||||  |||| ||  
 cau  uu cg cgc cug aaggua cacgaacug  uugguaca  aaug gu u
a   cu  -  a   a   c      c         cc        -a    a  a 


Annotation confidence Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature lca-miR-218

Accession MIMAT0002568
Description Lemur catta lca-miR-218 mature miRNA
Sequence 25 - UUGUGCUUGAUCUAACCAUGU - 45
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24