Stem-loop mml-mir-218-2

Accession

MI0002880

Description

Macaca mulatta mml-mir-218-2 precursor miRNA mir-218

Gene
family

RF00255; mir-218

Sequence

15513 reads, 100 reads per million, 8 experiments

gaccagucgcugcggggcuuuccuUUGUGCUUGAUCUAACCAUGUgguggaacgauggaaacggaacAUGGUUCUGUCAAGCACCGCGgaaagcaccgugcucuccugca
...(((..((.((((.(((((((...(((((((((..((((((((..((............))..))))))))..)))))))))...))))))).))))))....)))..

Structure

gac   --uc  u    g       uUU         CU        gg  gaacg 
   cag    gc gcgg gcuuucc   GUGCUUGAU  AACCAUGU  ug     a
   |||    || |||| |||||||   |||||||||  ||||||||  ||      
   guc    cg ugcc cgaaagG   CACGAACUG  UUGGUAca  gc     u
-ac   cucu  -    a       CGC         UC        ag  aaagg 

Annotation confidence High

Genome context

chr6: 167032434-167032543 [-]

Mature mml-miR-218-5p

• Accession: MIMAT0002574
• Description: Macaca mulatta mml-miR-218-5p mature miRNA
• Sequence: 25 - UUGUGCUUGAUCUAACCAUGU - 45
• Evidence: experimental ; Illumina [2]

Mature mml-miR-218-2-3p

• Accession: MIMAT0026589
• Description: Macaca mulatta mml-miR-218-2-3p mature miRNA
• Sequence: 68 - AUGGUUCUGUCAAGCACCGCG - 88
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45