miRBase entry: mml-mir-223

Stem-loop mml-mir-223


Accession
MI0002897
Description
Macaca mulatta mml-mir-223 precursor miRNA

Literature search
2 open access papers mention mml-mir-223
(5 sentences)

Sequence

521 reads, 6 reads per million, 9 experiments
cccggccuccugcagugccacgcuccguguauuugacaagcugaguuggacacuccgugugguagagUGUCAGUUUGUCAAAUACCCCaagugcggcauaugcuuaccag
...........((((((((.((((..(.((((((((((((((......(((((((.........))))))))))))))))))))).)..)))).))))).))).......

Structure
cccggccuccu   -     a    cc u              gaguug       cgu 
           gca gugcc cgcu  g guauuugacaagcu      gacacuc   g
           ||| ||||| ||||  | ||||||||||||||      |||||||   u
           cgu uacgg guga  C CAUAAACUGUUUGA      CUGUgag   g
----gaccauu   a     c    aC C              ------       aug 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chrX: 60234773-60234882 [+]

Database links

Mature mml-miR-223

Accession MIMAT0002588
Description Macaca mulatta mml-miR-223 mature miRNA
Sequence 68 - UGUCAGUUUGUCAAAUACCCC - 88
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24