Stem-loop ppa-mir-224

Accession

MI0002908

Description

Pan paniscus ppa-mir-224 precursor miRNA

Sequence

gggcuuuCAAGUCACUAGUGGUUCCGUUUAguagaugauugugcauuguuucaaaauggugcccuagugacuacaaagccc
(((((((..(((((((((.(((.((((((.(.(((((((.....)))))))).)))))).))))))))))))..)))))))

Structure

       CA         U   U      A u       u 
gggcuuu  AGUCACUAG GGU CCGUUU g agaugau g
|||||||  ||||||||| ||| |||||| | ||||||| u
cccgaaa  ucagugauc ccg gguaaa c uuuguua g
       ca         -   u      a -       c 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chrX: 151495584-151495664 [-]

Mature ppa-miR-224

• Accession: MIMAT0002599
• Description: Pan paniscus ppa-miR-224 mature miRNA
• Sequence: 8 - CAAGUCACUAGUGGUUCCGUUUA - 30
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24