miRBase entry: mne-mir-197

Stem-loop mne-mir-197


Accession
MI0002911
Description
Macaca nemestrina mne-mir-197 precursor miRNA


Sequence


ggcugugccggguagagagggcagugggagguaagagcucuucacccUUCACCACCUUCUCCACCCGGCauggcc
(((((((((((((.(((((((..(((((.((((((....))).))).)))))..))))))).)))))))))))))

Structure
             a       ca     a   -   a 
ggcugugccgggu gagaggg  guggg ggu aag g
||||||||||||| |||||||  ||||| ||| |||  
ccgguaCGGCCCA CUCUUCC  CACUU cca uuc c
             C       AC     c   c   u 


Annotation confidence Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature mne-miR-197

Accession MIMAT0002602
Description Macaca nemestrina mne-miR-197 mature miRNA
Sequence 48 - UUCACCACCUUCUCCACCCGGC - 69
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24