miRBase entry: age-mir-197

Stem-loop age-mir-197


Accession
MI0002912
Description
Ateles geoffroyi age-mir-197 precursor miRNA
Gene family
MIPF0000123; mir-197


Sequence

ggcugugccggguagagagggcagugggagguaagagcucuucacccUUCACCACCUUCUCCACCCAGCauggcc
((((((((.((((.(((((((..(((((.((((((....))).))).)))))..))))))).)))).))))))))

Structure
        c    a       ca     a   -   a 
ggcugugc gggu gagaggg  guggg ggu aag g
|||||||| |||| |||||||  ||||| ||| |||  
ccgguaCG CCCA CUCUUCC  CACUU cca uuc c
        A    C       AC     c   c   u 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature age-miR-197

Accession MIMAT0002603
Description Ateles geoffroyi age-miR-197 mature miRNA
Sequence 48 - UUCACCACCUUCUCCACCCAGC - 69
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24