Stem-loop mml-mir-198

Accession

MI0002919

Description

Macaca mulatta mml-mir-198 precursor miRNA

Literature search

1 open access papers mention mml-mir-198
(1 sentences)

Sequence

122 reads, 1.0 reads per million, 37 experiments

ucauuGGUCCAGAGGGGAAAUAGGuuccugugauuuuuccuucuucucuguagaauaaauga
(((((..(((((((((((...(((..............))))))))))))..))...)))))

Structure

     -GG  --         AAU   uuccug 
ucauu   UC  CAGAGGGGA   AGG      u
|||||   ||  |||||||||   |||       
aguaa   ag  gucucuucu   ucc      g
     aua  au         ---   uuuuua 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

2: 155876138-155876199 [+]

Mature mml-miR-198-5p

• Accession: MIMAT0002610
• Description: Macaca mulatta mml-miR-198-5p mature miRNA
• Sequence: 6 - GGUCCAGAGGGGAAAUAGG - 24
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24