Accession
MI0002933
Description
Pan troglodytes
ptr-mir-181a-1 precursor miRNA
Sequence
ugaguuuugagguugcuucagugAACAUUCAACGCUGUCGGUGAGUuuggaauuaaaaucaaaACCAUCGACCGUUGAUUGUACCcuauggcuaaccaucaucuacucca
.((((..((((((((((..((.(.(((.((((((..(((((((.((((.((.......)).))))))))))))))))).))).).))..))).)))).)))...))))..
.((((..((((((((((..((.(.(((.((((((..(((((((.((((.((.......)).))))))))))))))))).))).).))..))).)))).)))...))))..
Structure
-u -uu - - uc u A U CU A g au gagu uga gguu gcu ag g ACA UCAACG GUCGGUG GUuu ga u |||| ||| |||| ||| || | ||| |||||| ||||||| |||| || a cuca acu ccaa cgg uc C UGU AGUUGC CAGCUAC CAaa cu a ac ucu a u ua C A U -- - a aa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr1: 177685358-177685467 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-181a-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptr-miR-181a-5p
| Accession | MIMAT0002505 |
| Description | Pan troglodytes ptr-miR-181a-5p mature miRNA |
| Sequence | 24 - AACAUUCAACGCUGUCGGUGAGU - 46 |
| Evidence | not_experimental |
Mature ptr-miR-181a-3p
| Accession | MIMAT0002624 |
| Description | Pan troglodytes ptr-miR-181a-3p mature miRNA |
| Sequence | 64 - ACCAUCGACCGUUGAUUGUACC - 85 |
| Evidence | not_experimental |
References
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