Stem-loop lca-mir-16

Accession

MI0002956

Description

Lemur catta lca-mir-16 precursor miRNA

Sequence

gucagcagugccuUAGCAGCACGUAAAUAUUGGUGuuaagauucuaaaauuaucucuaaguauuaacugugccg
..................((((((.((((((((.(.(((..........))).).)).)))))).)).))))..

Structure

gucagcagugccuUAGCA    -  A      -  U u   gauu 
                  GCAC GU AAUAUU GG G uaa    c
                  |||| || |||||| || | |||     
                  cgug ca uuauga uc c auu    u
----------------gc    u  a      a  u u   aaaa 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lca-miR-16

• Accession: MIMAT0002649
• Description: Lemur catta lca-miR-16 mature miRNA
• Sequence: 14 - UAGCAGCACGUAAAUAUUGGUG - 35
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24