Accession
MI0002960
Description
Pongo pygmaeus
ppy-mir-16-1 precursor miRNA
Sequence
gucagcagugccuUAGCAGCACGUAAAUAUUGGcguuaagauucuaaaauuaucuccaguauuaacugugcugcugaaguaagguugac
((((((..(((.((((((((((((.((((((((.(.(((..........))).).)))))))).)).)))))))))).)))..))))))
((((((..(((.((((((((((((.((((((((.(.(((..........))).).)))))))).)).)))))))))).)))..))))))
Structure
ag c - A c u gauu
gucagc ugc uUAGCAGCAC GU AAUAUUGG g uaa c
|||||| ||| |||||||||| || |||||||| | |||
caguug aug agucgucgug ca uuaugacc c auu u
ga a u a u u aaaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.
Genome context
chr13: 50305071-50305159 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-16-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppy-miR-16
| Accession | MIMAT0002653 |
| Description | Pongo pygmaeus ppy-miR-16 mature miRNA |
| Sequence | 14 - UAGCAGCACGUAAAUAUUGG - 33 |
| Evidence | not_experimental |
References
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