Stem-loop mml-mir-92a-1

Accession

MI0003006

Description

Macaca mulatta mml-mir-92a-1 precursor miRNA

Literature search

2 open access papers mention mml-mir-92a-1
(8 sentences)

Sequence

30602518 reads, 76233.0 reads per million, 153 experiments

cuuucuacacAGGUUGGGAUCGGUUGCAAUGcuguguuucuguauggUAUUGCACUUGUCCCGGCCUGUUGAguuugg
....((..((((((((((((.(((.(((((((((((......)))))))))))))).))))))))))))..)).....

Structure

-cuuu  ac            C   U           uu 
     cu  acAGGUUGGGAU GGU GCAAUGcugug  u
     ||  |||||||||||| ||| |||||||||||   
     gA  UGUCCGGCCCUG UCA CGUUAUgguau  c
gguuu  GU            U   -           gu 

Annotation confidence Medium

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [2]. The expression of this mature miRNA was validated by Miska et al [1].

Genome context

17: 73152822-73152899 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from mml-mir-92a-1

Mature mml-miR-92a-1-5p

• Accession: MIMAT0061163
• Description: Macaca mulatta mml-miR-92a-1-5p mature miRNA
• Sequence: 11 - AGGUUGGGAUCGGUUGCAAUG - 31
• Evidence: experimental ; Illumina [2]

Mature mml-miR-92a-1-3p

• Accession: MIMAT0002706
• Description: Macaca mulatta mml-miR-92a-1-3p mature miRNA
• Sequence: 48 - UAUUGCACUUGUCCCGGCCUGUUGA - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 15345052
   Microarray analysis of microRNA expression in the developing mammalian brain
   Miska EA, Alvarez-Saavedra E, Townsend M, Yoshii A, Sestan N, Rakic P, Constantine-Paton M, Horvitz HR
   Genome Biol (2004) 5:R68


2. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24