miRBase entry: mne-mir-18

Stem-loop mne-mir-18


Accession
MI0003020
Description
Macaca nemestrina mne-mir-18 precursor miRNA


Sequence


uguucUAAGGUGCAUCUAGUGCAGAUAgugaaguagauuagcaucuacugcccuaagugcuccuucuggca
((((..((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).))))..))))

Structure
    cU    U    C   U    A   -  aa u 
uguu  AAGG GCAU UAG GCAG UAg ug  g a
||||  |||| |||| ||| |||| ||| ||  | g
acgg  uucc cgug auc cguc auc ac  u a
    uc    u    a   c    -   u  ga u 


Annotation confidence Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature mne-miR-18

Accession MIMAT0002723
Description Macaca nemestrina mne-miR-18 mature miRNA
Sequence 6 - UAAGGUGCAUCUAGUGCAGAUA - 27
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24