miRBase entry: mne-mir-19a

Stem-loop mne-mir-19a


Accession
MI0003021
Description
Macaca nemestrina mne-mir-19a precursor miRNA


Sequence

gcaguccucuguuaguuuugcauaguugcacuacaggaagaauguaguUGUGCAAAUCUAUGCAAAACUGAugguggccugc
((((.((.(((((((((((((((((((((((((((.......))))...))))))..))))))))))))))))).)).))))

Structure
    u  u                 --      ---    gg 
gcag cc cuguuaguuuugcauag  uugcac   uaca  a
|||| || |||||||||||||||||  ||||||   ||||  a
cguc gg gguAGUCAAAACGUAUC  AACGUG   augu  g
    c  u                 UA      Uug    aa 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature mne-miR-19a

Accession MIMAT0002724
Description Macaca nemestrina mne-miR-19a mature miRNA
Sequence 49 - UGUGCAAAUCUAUGCAAAACUGA - 71
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24