miRBase entry: ggo-mir-194

Stem-loop ggo-mir-194

Accession

MI0003030

Description

Gorilla gorilla ggo-mir-194 precursor miRNA

Sequence

augguguuaucaagUGUAACAGCAACUCCAUGUGGAcuguguaccaauuuccaguggagaugcuguuacuuuugaugguuaccaa
.(((((.(((((((.(((((((((.((((((.((((..((......)).)))))))))).))))))))).)))))))..))))).

Structure

a     -u       U         A      G    cu  gu 
 uggug  uaucaag GUAACAGCA CUCCAU UGGA  gu  a
 |||||  ||||||| ||||||||| |||||| ||||  ||   
 accau  guaguuu cauugucgu gaggug accu  ua  c
a     ug       u         a      -    -u  ac

Annotation confidence Not enough data

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Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chr1: 200132006-200132090 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-194

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-194

Accession	MIMAT0002733
Description	Gorilla gorilla ggo-miR-194 mature miRNA
Sequence	15 - UGUAACAGCAACUCCAUGUGGA - 36
Evidence	not_experimental

References

PubMed ID: 15652478
Phylogenetic shadowing and computational identification of human microRNA genes
"Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
"Cell (2005) 120:21-24