Stem-loop sla-mir-27a

Accession

MI0003055

Description

Saguinus labiatus sla-mir-27a precursor miRNA

Sequence

cugaggagcagggcuuagcugcuugugagcaggguucacuccaagucaugUUCACAGUGGCUAAGUUCCGCCccccag
(((.((.((.(((((((((((((.(((((((((.((......)).)).)))))))))))))))))))).)).)).)))

Structure

   a  a  a             u       -  g  ca 
cug gg gc gggcuuagcugcu gugagca gg uu  c
||| || || ||||||||||||| ||||||| || ||   
gac cc CG CUUGAAUCGGUGA CACUUgu cu aa  u
   c  C  C             -       a  g  cc 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature sla-miR-27a

• Accession: MIMAT0002755
• Description: Saguinus labiatus sla-miR-27a mature miRNA
• Sequence: 51 - UUCACAGUGGCUAAGUUCCGCC - 72
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24