miRBase entry: mne-mir-27a

Stem-loop mne-mir-27a

Accession

MI0003057

Description

Macaca nemestrina mne-mir-27a precursor miRNA

Sequence

cugaggagcagggcuuagcugcuugugagcaggguccacaccaagucgugUUCACAGUGGCUAAGUUCCGCCcccccag
(((.((.((.(((((((((((((.(((((((.((.(........))).)))))))))))))))))))).))..)).)))

Structure

   a  -a  a             u       g  u cac 
cug gg  gc gggcuuagcugcu gugagca gg c   a
||| ||  || ||||||||||||| ||||||| || |    
gac cc  CG CUUGAAUCGGUGA CACUUgu cu g   c
   c  cC  C             -       g  - aac

Annotation confidence Not enough data

Do you think this miRNA is real?

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Database links

Mature mne-miR-27a

Accession	MIMAT0002757
Description	Macaca nemestrina mne-miR-27a mature miRNA
Sequence	51 - UUCACAGUGGCUAAGUUCCGCC - 72
Evidence	not_experimental

References

PubMed ID: 15652478
Phylogenetic shadowing and computational identification of human microRNA genes
"Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
"Cell (2005) 120:21-24