Accession
MI0003072
Description
Pan troglodytes
ptr-mir-25 precursor miRNA
Literature search
1 open access papers mention ptr-mir-25
(1 sentences)
(1 sentences)
Sequence
ggccaguguugagaggcggagacuugggcaauugcuggacgcugcccugggCAUUGCACUUGUCUCGGUCUGacagugccggcc
((((.((((((..((((.(((((..(.(((((..((((........))))..))))).)..))))).))))..)))))).))))
((((.((((((..((((.(((((..(.(((((..((((........))))..))))).)..))))).))))..)))))).))))
Structure
a ag g uu g ug acg
ggcc guguug aggc gagac g gcaau cugg c
|||| |||||| |||| ||||| | ||||| ||||
ccgg cgugac UCUG CUCUG C CGUUA gguc u
c aG G UU A Cg ccg
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated. The assembled chimp genome sequence forces a single deletion in the 3' region of the chimp mature miRNA with respect to the human and rodent sequences.
Genome context
chr7: 103150814-103150897 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ptr-mir-25
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptr-miR-25
| Accession | MIMAT0002771 |
| Description | Pan troglodytes ptr-miR-25 mature miRNA |
| Sequence | 52 - CAUUGCACUUGUCUCGGUCUG - 72 |
| Evidence | not_experimental |
References
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