Stem-loop lla-mir-106b

Accession

MI0003078

Description

Lagothrix lagotricha lla-mir-106b precursor miRNA

Sequence

ccugccggggcUAAAGUGCUGACAGUGCAGAUaguguccucuccgugcuaccgcacuguggguacuugcugcuccagcagg
(((((.(((((..(((((((.(((((((.(.(((((.(......))))))).))))))).)))))))...))))).)))))

Structure

     c     -UA       G       A A     u cu 
ccugc ggggc   AAGUGCU ACAGUGC G Uagug c  c
||||| |||||   ||||||| ||||||| | ||||| |   
ggacg ccucg   uucaugg ugucacg c aucgu g  u
     a     ucg       g       c -     - cc 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature lla-miR-106b

• Accession: MIMAT0002777
• Description: Lagothrix lagotricha lla-miR-106b mature miRNA
• Sequence: 12 - UAAAGUGCUGACAGUGCAGAU - 32
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24