Stem-loop sla-mir-183

Accession

MI0003090

Description

Saguinus labiatus sla-mir-183 precursor miRNA

Sequence

ccgcagaacgugacuccuguucugugUAUGGCACUGGUAGAAUUCACUGugaacagucucggucagugaauuaccgaagggccauaaacagagcagagacagauccucga
.((.((.(..((.(((.((((((((.((((((.((((((..(((((((((((......)))..))))))))))))..)).)))))).))))))))))).))..).)))).

Structure

c  c  a cg  a   c        g      A  --    GA        --   ac 
 cg ag a  ug cuc uguucugu UAUGGC CU  GGUA  AUUCACUG  uga  a
 || || |  || ||| |||||||| |||||| ||  ||||  ||||||||  |||   
 gc uc u  ac gag acgagaca auaccg ga  ccau  uaagugac  gcu  g
a  -  c ag  a   -        a      g  ag    --        ug   cu 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature sla-miR-183

• Accession: MIMAT0002789
• Description: Saguinus labiatus sla-miR-183 mature miRNA
• Sequence: 27 - UAUGGCACUGGUAGAAUUCACUG - 49
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24