miRBase entry: sla-mir-183

Stem-loop sla-mir-183


Accession
MI0003090
Description
Saguinus labiatus sla-mir-183 precursor miRNA


Sequence


ccgcagaacgugacuccuguucugugUAUGGCACUGGUAGAAUUCACUGugaacagucucggucagugaauuaccgaagggccauaaacagagcagagacagauccucga
.((.((.(..((.(((.((((((((.((((((.((((((..(((((((((((......)))..))))))))))))..)).)))))).))))))))))).))..).)))).

Structure
c  c  a cg  a   c        g      A  --    GA        --   ac 
 cg ag a  ug cuc uguucugu UAUGGC CU  GGUA  AUUCACUG  uga  a
 || || |  || ||| |||||||| |||||| ||  ||||  ||||||||  |||   
 gc uc u  ac gag acgagaca auaccg ga  ccau  uaagugac  gcu  g
a  -  c ag  a   -        a      g  ag    --        ug   cu 


Annotation confidence Low
Do you think this miRNA is real?
Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature sla-miR-183

Accession MIMAT0002789
Description Saguinus labiatus sla-miR-183 mature miRNA
Sequence 27 - UAUGGCACUGGUAGAAUUCACUG - 49
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24