miRBase entry: ppa-mir-92a-2

Stem-loop ppa-mir-92a-2

Accession

MI0003104

Description

Pan paniscus ppa-mir-92a-2 precursor miRNA

Sequence

ucaucccuggguggggauuuguugcauuacuuguguucuauauaaagUAUUGCACUUGUCCCGGCCUGUggaaga
((.(((.(((((.(((((..((.(((.(((((((((...)))).))))).)))))..))))).))))).))).))

Structure

  a   c     g     uu  u   u     -    u 
uc ucc ugggu gggau  gu gca uacuu gugu  
|| ||| ||||| |||||  || ||| ||||| |||| c
ag agg GUCCG CCCUG  CA CGU AUgaa uaua  
  a   U     G     UU  -   U     a    u

Annotation confidence Not enough data

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Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

chrX: 133615832-133615906 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ppa-mir-92a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppa-miR-92a

Accession	MIMAT0002685
Description	Pan paniscus ppa-miR-92a mature miRNA
Sequence	48 - UAUUGCACUUGUCCCGGCCUGU - 69
Evidence	not_experimental

References

PubMed ID: 15652478
Phylogenetic shadowing and computational identification of human microRNA genes
"Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
"Cell (2005) 120:21-24