miRBase entry: hsa-mir-518e

Stem-loop hsa-mir-518e


Accession
MI0003169
Symbol
HGNC: MIR518E
Description
Homo sapiens hsa-mir-518e precursor miRNA mir-515
Gene
family?
RF00639; mir-515

Literature search
9 open access papers mention hsa-mir-518e
(11 sentences)

Sequence

96 reads, 3 reads per million, 18 experiments
ucucaggcugugaccCUCUAGAGGGAAGCGCUUUCUGuuggcuaaaagaaaagAAAGCGCUUCCCUUCAGAGUGuuaacgcuuugaga
((((((((..((((.((((.((((((((((((((((...............)))))))))))))))).)))).))))..)).))))))

Structure
      -  ug    c    A                Guuggc 
ucucag gc  ugac CUCU GAGGGAAGCGCUUUCU      u
|||||| ||  |||| |||| ||||||||||||||||      a
agaguu cg  auuG GAGA UUCCCUUCGCGAAAga      a
      u  ca    U    C                aaagaa 


Annotation confidence High
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Genome context
chr19: 53729838-53729925 [+]
Clustered miRNAs
9 other miRNAs are < 10 kb from hsa-mir-518e
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-518e is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-518e-5p

Accession MIMAT0005450
Description Homo sapiens hsa-miR-518e-5p mature miRNA
Sequence 16 - CUCUAGAGGGAAGCGCUUUCUG - 37
Evidence experimental
array-cloned [1], cloned [2]
Database links
Predicted targets

Mature hsa-miR-518e-3p

Accession MIMAT0002861
Description Homo sapiens hsa-miR-518e-3p mature miRNA
Sequence 54 - AAAGCGCUUCCCUUCAGAGUG - 74
Evidence experimental
array-cloned [1], cloned [2]

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 15965474
    Identification of hundreds of conserved and nonconserved human microRNAs
    "Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z"
    "Nat Genet (2005) 37:766-770