Stem-loop osa-MIR529a

Accession

MI0003202

Description

Oryza sativa osa-MIR529a precursor miRNA

Literature search

21 open access papers mention osa-MIR529a
(64 sentences)

Sequence

1094203 reads, 6183.0 reads per million, 139 experiments

gaAGAAGAGAGAGAGUACAGCCUuaguucagaucacauaugacuaucuuuugcgagucugaucgauacucugaugaaggCUGUACCCUCUCUCUUCUUC
(((((((((((((.((((((((((...(((((((..((..((((..(....)..))))..)).))...)))))..)))))))))).)))))))))))))

Structure

             A          agu     ---  ac  au    au u 
gaAGAAGAGAGAG GUACAGCCUu   ucaga   uc  au  gacu  c u
||||||||||||| ||||||||||   |||||   ||  ||  ||||  |  
CUUCUUCUCUCUC CAUGUCggaa   agucu   ag  ua  cuga  g u
             C          -gu     cau  -c  gu    gc u 

Annotation confidence High

Genome context

2: 16227805-16227903 [+]

Mature osa-miR529a-5p

• Accession: MIMAT0055993
• Description: Oryza sativa osa-miR529a-5p mature miRNA
• Sequence: 3 - AGAAGAGAGAGAGUACAGCCU - 23
• Evidence: experimental ; unknown

Mature osa-miR529a-3p

• Accession: MIMAT0002885
• Description: Oryza sativa osa-miR529a-3p mature miRNA
• Sequence: 80 - CUGUACCCUCUCUCUUCUUC - 99
• Evidence: experimental ; Northern [1]

References

1. PubMed ID: 16126864
   Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice
   "Liu B, Li P, Li X, Liu C, Cao S, Chu C, Cao X"
   "Plant Physiol (2005) 139:296-305