Stem-loop osa-MIR529a

Accession

MI0003202

Description

Oryza sativa osa-MIR529a precursor miRNA

Literature search

21 open access papers mention osa-MIR529a
(62 sentences)

Sequence

457 reads, 318 reads per million, 2 experiments

gaagaagagagagaguacagccuuaguucagaucacauaugacuaucuuuugcgagucugaucgauacucugaugaaggCUGUACCCUCUCUCUUCUUC
(((((((((((((.((((((((((...(((((((..((..((((..(....)..))))..)).))...)))))..)))))))))).)))))))))))))

Structure

             a          agu     ---  ac  au    au u 
gaagaagagagag guacagccuu   ucaga   uc  au  gacu  c u
||||||||||||| ||||||||||   |||||   ||  ||  ||||  |  
CUUCUUCUCUCUC CAUGUCggaa   agucu   ag  ua  cuga  g u
             C          -gu     cau  -c  gu    gc u 

Annotation confidence Not enough data

Genome context

Chr2: 16227805-16227903 [+]

Mature osa-miR529a

• Accession: MIMAT0002885
• Description: Oryza sativa osa-miR529a mature miRNA
• Sequence: 80 - CUGUACCCUCUCUCUUCUUC - 99
• Evidence: experimental ; Northern [1]

References

1. PubMed ID: 16126864
   Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice
   "Liu B, Li P, Li X, Liu C, Cao S, Chu C, Cao X"
   "Plant Physiol (2005) 139:296-305