Stem-loop osa-MIR531a

Accession

MI0003204

Description

Oryza sativa osa-MIR531a precursor miRNA

Literature search

8 open access papers mention osa-MIR531a
(15 sentences)

Sequence

130790 reads, 588.0 reads per million, 111 experiments

ggcgccgccgagccuugCUCGCCGGGGCUGCGUGCCGCCAuagcUGGCGCGCAUCCCCGUCGAGCguugcucgacggugcc
(((((((.(((((..((((((.(((((.((((((((((....)).)))))))).))))).))))))..))))).)))))))

Structure

       c     cu      C     C        -  C 
ggcgccg cgagc  ugCUCG CGGGG UGCGUGCC GC A
||||||| |||||  |||||| ||||| |||||||| ||  
ccguggc gcucg  gCGAGC GCCCC ACGCGCGG cg u
       a     uu      U     U        U  a 

Annotation confidence Low

Genome context

8: 1220358-1220438 [-]

Mature osa-miR531a-5p

• Accession: MIMAT0002887
• Description: Oryza sativa osa-miR531a-5p mature miRNA
• Sequence: 18 - CUCGCCGGGGCUGCGUGCCGCCA - 40
• Evidence: experimental ; Northern [1]

Mature osa-miR531a-3p

• Accession: MIMAT0055994
• Description: Oryza sativa osa-miR531a-3p mature miRNA
• Sequence: 45 - UGGCGCGCAUCCCCGUCGAGC - 65
• Evidence: experimental ; unknown

References

1. PubMed ID: 16126864
   Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice
   "Liu B, Li P, Li X, Liu C, Cao S, Chu C, Cao X"
   "Plant Physiol (2005) 139:296-305