Accession
MI0003207
Description
Fugu rubripes
fru-let-7h precursor miRNA
Sequence
123082
reads,
1325.0
reads per million, 12 experiments
uguggUGAGGUAGUAAGUUGUGUUGUUguaggggaagauugugcacccuguucaggagauaaCUAUACAACUUACUGCCUUCCU
...((.(((((((((((((((((.(((((((((............)))).........))))).))))))))))))))))))).
...((.(((((((((((((((((.(((((((((............)))).........))))).))))))))))))))))))).
Structure
ugu U U --------- gaaga gg GAGGUAGUAAGUUGUGU GUUgu aggg u || ||||||||||||||||| ||||| |||| CC UUCCGUCAUUCAACAUA Caaua uccc u --U - U gaggacuug acgug
Annotation confidence
High
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
ref|NC_042287.1|: 9703654-9703737 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from fru-let-7h
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fru-let-7h-5p
| Accession | MIMAT0002892 |
| Description | Fugu rubripes fru-let-7h-5p mature miRNA |
| Sequence | 6 - UGAGGUAGUAAGUUGUGUUGUU - 27 |
| Evidence | not_experimental |
Mature fru-let-7h-3p
| Accession | MIMAT0052807 |
| Description | Fugu rubripes fru-let-7h-3p mature miRNA |
| Sequence | 63 - CUAUACAACUUACUGCCUUCCU - 84 |
| Evidence | not_experimental |
References
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