Stem-loop tni-let-7h

Accession

MI0003208

Description

Tetraodon nigroviridis tni-let-7h precursor miRNA

Sequence

169787 reads, 6217.0 reads per million, 3 experiments

aauuggcuuugcuguggUGAGGUAGUAAGUUGUGUUGUUguuggggaucaagauugugcacccugucaaggagauaaCUAUACAACUUACUGCCUUCCU
....(((...)))..((.(((((((((((((((((.((((((((((..((......))..))))........)))))).))))))))))))))))))).

Structure

aauuggcuuugcugu  U                 U      --------    au  ag 
               gg GAGGUAGUAAGUUGUGU GUUguu        gggg  ca  a
               || ||||||||||||||||| ||||||        ||||  ||   
               CC UUCCGUCAUUCAACAUA Caauag        uccc  gu  u
--------------U  -                 U      aggaacug    ac  gu 

Annotation confidence High

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

9: 3596422-3596520 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tni-let-7h

Mature tni-let-7h-5p

• Accession: MIMAT0002893
• Description: Tetraodon nigroviridis tni-let-7h-5p mature miRNA
• Sequence: 18 - UGAGGUAGUAAGUUGUGUUGUU - 39
• Evidence: not_experimental

Mature tni-let-7h-3p

• Accession: MIMAT0052925
• Description: Tetraodon nigroviridis tni-let-7h-3p mature miRNA
• Sequence: 78 - CUAUACAACUUACUGCCUUCCU - 99
• Evidence: not_experimental

References