Stem-loop fru-mir-124-3

Accession

MI0003211

Description

Fugu rubripes fru-mir-124-3 precursor miRNA

Sequence

242379 reads, 2185.0 reads per million, 12 experiments

gguuugagcucuuUGUGUUCACAGUGGACCUUGAUuuaauuucaauacaauUAAGGCACGCGGUGAAUGCCAAgagagaagcc
(((((...(((((.((((((((.(((..((((((((............))))))))..))).)))))))).)))))..)))))

Structure

     gag     U        A   GA        uaauu 
gguuu   cucuu GUGUUCAC GUG  CCUUGAUu     u
|||||   ||||| |||||||| |||  ||||||||      
ccgaa   gagAA CGUAAGUG CGC  GGAAUuaa     c
     -ga     C        G   AC        cauaa 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042286.1|: 7187906-7187988 [-]

Mature fru-miR-124-3-5p

• Accession: MIMAT0052809
• Description: Fugu rubripes fru-miR-124-3-5p mature miRNA
• Sequence: 14 - UGUGUUCACAGUGGACCUUGAU - 35
• Evidence: not_experimental

Mature fru-miR-124-3p

• Accession: MIMAT0002896
• Description: Fugu rubripes fru-miR-124-3p mature miRNA
• Sequence: 52 - UAAGGCACGCGGUGAAUGCCAA - 73
• Evidence: not_experimental

References