Stem-loop tni-mir-222

Accession

MI0003220

Description

Tetraodon nigroviridis tni-mir-222 precursor miRNA

Sequence

9340 reads, 342.0 reads per million, 3 experiments

caguUGCUCAGUAGGCAGUGUAGAUCCUguguagcaaucagcAGCUACAUCUGGCUACUGGGUCUCug
(((..(((((((((.((((((((...(((.........)))...))))).))).)))))))))..)))

Structure

   uU         G   -     AUC   ugu 
cag  GCUCAGUAG CAG UGUAG   CUg   a
|||  ||||||||| ||| |||||   |||   g
guC  UGGGUCAUC GUC ACAUC   gac   c
   UC         G   U     GAc   uaa 

Annotation confidence High

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

Unknown

Mature tni-miR-222-5p

• Accession: MIMAT0052929
• Description: Tetraodon nigroviridis tni-miR-222-5p mature miRNA
• Sequence: 5 - UGCUCAGUAGGCAGUGUAGAUCCU - 28
• Evidence: not_experimental

Mature tni-miR-222-3p

• Accession: MIMAT0002905
• Description: Tetraodon nigroviridis tni-miR-222-3p mature miRNA
• Sequence: 43 - AGCUACAUCUGGCUACUGGGUCUC - 66
• Evidence: not_experimental

References