Stem-loop fru-mir-221

Accession

MI0003221

Description

Fugu rubripes fru-mir-221 precursor miRNA

Sequence

ccugaaccuggcauacaauguagauuucugugugcuuggauucuacAGCUACAUUGUCUGCUGGGUUUCcggauagc
((.((((((((((.(((((((((....(((((...........)))))))))))))).))))))))))..)).....

Structure

-----  -u          u         auuu     ugcu 
     cc  gaaccuggca acaauguag    cugug    u
     ||  |||||||||| |||||||||    |||||    g
     gg  UUUGGGUCGU UGUUACAUC    GAcau    g
cgaua  cC          C         ----     cuua 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602535.1: 10152714-10152790 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-221

Mature fru-miR-221

• Accession: MIMAT0002906
• Description: Fugu rubripes fru-miR-221 mature miRNA
• Sequence: 47 - AGCUACAUUGUCUGCUGGGUUUC - 69
• Evidence: not_experimental

References