Accession
MI0003222
Description
Tetraodon nigroviridis
tni-mir-221 precursor miRNA
Sequence
13265
reads,
486.0
reads per million, 3 experiments
ccugaACCUGGCAUACAAUGUAGAUUUcugugugcuuggauucuacAGCUACAUUGUCUGCUGGGUUUC
...((((((((((.(((((((((....(((((...........)))))))))))))).)))))))))).
...((((((((((.(((((((((....(((((...........)))))))))))))).)))))))))).
Structure
ccu U AUUU ugcu gaACCUGGCA ACAAUGUAG cugug u |||||||||| ||||||||| ||||| g UUUGGGUCGU UGUUACAUC GAcau g --C C ---- cuua
Annotation confidence
High
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
Unknown
Database links
Mature tni-miR-221-5p
| Accession | MIMAT0052930 |
| Description | Tetraodon nigroviridis tni-miR-221-5p mature miRNA |
| Sequence | 6 - ACCUGGCAUACAAUGUAGAUUU - 27 |
| Evidence | not_experimental |
Mature tni-miR-221-3p
| Accession | MIMAT0002907 |
| Description | Tetraodon nigroviridis tni-miR-221-3p mature miRNA |
| Sequence | 47 - AGCUACAUUGUCUGCUGGGUUUC - 69 |
| Evidence | not_experimental |
References
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