Stem-loop fru-mir-23a-2

Accession

MI0003227

Description

Fugu rubripes fru-mir-23a-2 precursor miRNA

Sequence

131658 reads, 1680.0 reads per million, 12 experiments

agcuggaGGGAUUCCUGGCAGAGUGAUUUggcugugauguaauguaaAUCACAUUGCCAGGGAUUUCCAaccagcug
((((((.((((((((((((((.((((((((((......))....)))))))).))))))))))))))...)))))).

Structure

-      --a              A        ----  ug 
 agcugg   GGGAUUCCUGGCAG GUGAUUUg    gc  u
 ||||||   |||||||||||||| ||||||||    ||   
 ucgacc   CUUUAGGGACCGUU CACUAaau    ug  g
g      aAC              A        guaa  ua 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042306.1|: 4801230-4801306 [-]

Mature fru-miR-23a-2-5p

• Accession: MIMAT0052821
• Description: Fugu rubripes fru-miR-23a-2-5p mature miRNA
• Sequence: 8 - GGGAUUCCUGGCAGAGUGAUUU - 29
• Evidence: not_experimental

Mature fru-miR-23a-3p

• Accession: MIMAT0002912
• Description: Fugu rubripes fru-miR-23a-3p mature miRNA
• Sequence: 48 - AUCACAUUGCCAGGGAUUUCCA - 69
• Evidence: not_experimental

References