Accession
MI0003239
Description
Fugu rubripes
fru-mir-92-2 precursor miRNA
Sequence
939716
reads,
16444.0
reads per million, 12 experiments
cAGGUGGGGAUCAGUAGCAAUGCUgugcacuggaaggUAUUGCACUUGUCCCGGCCUGUguag
(((((.(((((.(((.((((((((...........))))))))))).))))).))))).....
(((((.(((((.(((.((((((((...........))))))))))).))))).))))).....
Structure
----- G C A gugc
cAGGU GGGAU AGU GCAAUGCU a
||||| ||||| ||| |||||||| c
GUCCG CCCUG UCA CGUUAUgg u
gaugU G U - aagg
Annotation confidence
High
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
ref|NC_042297.1|: 16856124-16856186 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from fru-mir-92-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fru-miR-92-2-5p
| Accession | MIMAT0052830 |
| Description | Fugu rubripes fru-miR-92-2-5p mature miRNA |
| Sequence | 2 - AGGUGGGGAUCAGUAGCAAUGCU - 24 |
| Evidence | not_experimental |
Mature fru-miR-92-3p
| Accession | MIMAT0002924 |
| Description | Fugu rubripes fru-miR-92-3p mature miRNA |
| Sequence | 38 - UAUUGCACUUGUCCCGGCCUGU - 59 |
| Evidence | not_experimental |
References
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