Accession
MI0003263
Description
Fugu rubripes
fru-mir-30b precursor miRNA
Sequence
uuccggcucaguuggUGUAAACAUCCUACACUCAGCUgugauccuuugcggcagaggcugagagaagguuguuuacuugaacuggcugga
.((((((.(((((.(.(((((((.(((.(.(((((((.....((.....))....))))))).).))).))))))).).)))))))))))
.((((((.(((((.(.(((((((.(((.(.(((((((.....((.....))....))))))).).))).))))))).).)))))))))))
Structure
u u g U U A A gugau u uccggc caguu g GUAAACA CCU C CUCAGCU cc u |||||| ||||| | ||||||| ||| | ||||||| || u aggucg gucaa u cauuugu gga g gagucgg gg g - - g u u a a -agac c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
HE602546.1: 5585987-5586076 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from fru-mir-30b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fru-miR-30b
| Accession | MIMAT0002947 |
| Description | Fugu rubripes fru-miR-30b mature miRNA |
| Sequence | 16 - UGUAAACAUCCUACACUCAGCU - 37 |
| Evidence | not_experimental |
References
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