Stem-loop fru-mir-30b

Accession

MI0003263

Description

Fugu rubripes fru-mir-30b precursor miRNA

Sequence

uuccggcucaguuggUGUAAACAUCCUACACUCAGCUgugauccuuugcggcagaggcugagagaagguuguuuacuugaacuggcugga
.((((((.(((((.(.(((((((.(((.(.(((((((.....((.....))....))))))).).))).))))))).).)))))))))))

Structure

u      u     g U       U   A A       gugau  u 
 uccggc caguu g GUAAACA CCU C CUCAGCU     cc u
 |||||| ||||| | ||||||| ||| | |||||||     || u
 aggucg gucaa u cauuugu gga g gagucgg     gg g
-      -     g u       u   a a       -agac  c 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602546.1: 5585987-5586076 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-30b

Mature fru-miR-30b

• Accession: MIMAT0002947
• Description: Fugu rubripes fru-miR-30b mature miRNA
• Sequence: 16 - UGUAAACAUCCUACACUCAGCU - 37
• Evidence: not_experimental

References