Stem-loop fru-mir-27b

Accession

MI0003267

Description

Fugu rubripes fru-mir-27b precursor miRNA

Sequence

1691455 reads, 17131.0 reads per million, 12 experiments

aggcacAGAGCUUAGCUGAUUGGUGAACagugauugauuuccucuuugUUCACAGUGGCUAAGUUCUGCAccug
(((..((((((((((((.((((.(((((((.((.........)).)))))))))))))))))))))))..))).

Structure

-   ca            G    G       u  uug 
 agg  cAGAGCUUAGCU AUUG UGAACag ga   a
 |||  |||||||||||| |||| ||||||| ||   u
 ucc  GUCUUGAAUCGG UGAC ACUUguu cu   u
g   AC            -    -       u  ccu 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042305.1|: 11164649-11164722 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-27b

Mature fru-miR-27b-5p

• Accession: MIMAT0052843
• Description: Fugu rubripes fru-miR-27b-5p mature miRNA
• Sequence: 7 - AGAGCUUAGCUGAUUGGUGAAC - 28
• Evidence: not_experimental

Mature fru-miR-27b-3p

• Accession: MIMAT0002951
• Description: Fugu rubripes fru-miR-27b-3p mature miRNA
• Sequence: 49 - UUCACAGUGGCUAAGUUCUGCA - 70
• Evidence: not_experimental

References