miRBase entry: fru-mir-23b

Stem-loop fru-mir-23b

Accession

MI0003269

Description

Fugu rubripes fru-mir-23b precursor miRNA

Sequence

ggcugugaggguuccuggcgugcugauuugugacuuaugauaaaAUCACAUUGCCAGGGAUUACCAcacagcc
(((((((.((((((((((((((.((((((.............)))))))).))))))))))..)).)))))))

Structure

       a  --          -  c      gugac 
ggcugug gg  guuccuggcg ug ugauuu     u
||||||| ||  |||||||||| || ||||||     u
ccgacac CC  UAGGGACCGU AC ACUAaa     a
       A  AU          U  -      auagu

Annotation confidence Not enough data

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Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602555.1: 7173493-7173565 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from fru-mir-23b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature fru-miR-23b

Accession	MIMAT0002953
Description	Fugu rubripes fru-miR-23b mature miRNA
Sequence	45 - AUCACAUUGCCAGGGAUUACCA - 66
Evidence	not_experimental

Stem-loop fru-mir-23b

Mature fru-miR-23b

References