Accession
MI0003274
Description
Tetraodon nigroviridis
tni-mir-126 precursor miRNA
Sequence
542
reads,
20.0
reads per million, 3 experiments
cggccCAUUAUUACUUUUGGUACGCGcuaugccacucucaacUCGUACCGUGAGUAAUAAUGC
.....(((((((((((.(((((((.(...............).))))))).))))))))))).
.....(((((((((((.(((((((.(...............).))))))).))))))))))).
Structure
cggcc U C cuaugc
CAUUAUUACUU UGGUACG G c
||||||||||| ||||||| | a
GUAAUAAUGAG GCCAUGC c c
----C U U aacucu
Annotation confidence
High
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
4: 5708445-5708507 [-]
Database links
Mature tni-miR-126-5p
| Accession | MIMAT0052947 |
| Description | Tetraodon nigroviridis tni-miR-126-5p mature miRNA |
| Sequence | 6 - CAUUAUUACUUUUGGUACGCG - 26 |
| Evidence | not_experimental |
Mature tni-miR-126-3p
| Accession | MIMAT0002958 |
| Description | Tetraodon nigroviridis tni-miR-126-3p mature miRNA |
| Sequence | 43 - UCGUACCGUGAGUAAUAAUGC - 63 |
| Evidence | not_experimental |
References
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