Accession
MI0003278
Description
Tetraodon nigroviridis
tni-mir-148 precursor miRNA
Sequence
602
reads,
22.0
reads per million, 3 experiments
aaauAAAGUUCUGUGAUACACUUCGAcucugauuccucgcagUCAGUGCAUUACAGAACUUUGUuu
(((((((((((((((((.((((..((((.(((....))).)))))))).)))))))))))))))))
(((((((((((((((((.((((..((((.(((....))).)))))))).)))))))))))))))))
Structure
A UC c u
aaauAAAGUUCUGUGAU CACU GAcu uga u
||||||||||||||||| |||| |||| |||
uuUGUUUCAAGACAUUA GUGA CUga gcu c
C -- c c
Annotation confidence
High
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
2: 13327072-13327137 [-]
Database links
Mature tni-miR-148-5p
| Accession | MIMAT0052949 |
| Description | Tetraodon nigroviridis tni-miR-148-5p mature miRNA |
| Sequence | 5 - AAAGUUCUGUGAUACACUUCGA - 26 |
| Evidence | not_experimental |
Mature tni-miR-148-3p
| Accession | MIMAT0002962 |
| Description | Tetraodon nigroviridis tni-miR-148-3p mature miRNA |
| Sequence | 43 - UCAGUGCAUUACAGAACUUUGU - 64 |
| Evidence | not_experimental |
References
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