Stem-loop fru-mir-196a-1

Accession

MI0003299

Description

Fugu rubripes fru-mir-196a-1 precursor miRNA

Sequence

agcuggagcgugguuUAGGUAGUUUCAUGUUGUUGGGgauggcuuccuggcucggcaacaagaaacugccuugauuacgucaguu
.((((..((((((((.((((((((((.((((((((((...((...))...)))))))))).)))))))))).)))))))))))).

Structure

a    ga        U          A          gau  c 
 gcug  gcgugguu AGGUAGUUUC UGUUGUUGGG   gg  
 ||||  |||||||| |||||||||| ||||||||||   || u
 ugac  ugcauuag uccgucaaag acaacggcuc   cc  
u    --        u          a          ggu  u 

Annotation confidence Not enough data

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

HE602537.1: 7343319-7343403 [+]

Mature fru-miR-196a

• Accession: MIMAT0002955
• Description: Fugu rubripes fru-miR-196a mature miRNA
• Sequence: 16 - UAGGUAGUUUCAUGUUGUUGGG - 37
• Evidence: not_experimental

References