Stem-loop tni-mir-196a-1

Accession

MI0003300

Description

Tetraodon nigroviridis tni-mir-196a-1 precursor miRNA

Gene family

MIPF0000031; mir-196

Sequence

agcuggagcgugguuUAGGUAGUUUCAUGUUGUUGGGgauggcuuccuggcucggcaacaagaaacugccuugauuacgucaguucgucuucaucaagggc
.((((..((((((((.((((((((((.((((((((((...((...))...)))))))))).)))))))))).))))))))))))..(((((.....)))))

Structure

----------------a    ga        U          A          gau  c 
                 gcug  gcgugguu AGGUAGUUUC UGUUGUUGGG   gg  
                 ||||  |||||||| |||||||||| ||||||||||   || u
                 ugac  ugcauuag uccgucaaag acaacggcuc   cc  
cgggaacuacuucugcu    --        u          a          ggu  u 

Annotation confidence Not enough data

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

3: 685117-685217 [-]

Mature tni-miR-196a

• Accession: MIMAT0002956
• Description: Tetraodon nigroviridis tni-miR-196a mature miRNA
• Sequence: 16 - UAGGUAGUUUCAUGUUGUUGGG - 37
• Evidence: not_experimental

References