Accession
MI0003306
Description
Tetraodon nigroviridis
tni-mir-200b precursor miRNA
Sequence
ccaucuuacgaggcagcauuggauagcaucacuuuuucUAAUACUGCCUGGUAAUGAUGAugaucgucgucugcagg
.((((((((.((((((.((((((.............)))))).)))))).)))).))))..................
.((((((((.((((((.((((((.............)))))).)))))).)))).))))..................
Structure
-----------------c - g c uagca
cauc uuac aggcag auugga u
|||| |||| |||||| |||||| c
GUAG AAUG UCCGUC UAAUcu a
ggacgucugcugcuaguA U G A uuuuc
Annotation confidence
Low
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
Un_random: 2991281-2991357 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from tni-mir-200b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tni-miR-200b
| Accession | MIMAT0002984 |
| Description | Tetraodon nigroviridis tni-miR-200b mature miRNA |
| Sequence | 39 - UAAUACUGCCUGGUAAUGAUGA - 60 |
| Evidence | not_experimental |
References
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