Stem-loop fru-let-7b

Accession

MI0003344

Description

Fugu rubripes fru-let-7b precursor miRNA

Literature search

1 open access papers mention fru-let-7b
(6 sentences)

Sequence

1602602 reads, 16751.0 reads per million, 12 experiments

cagggUGAGGUAGUAGGUUGUGUGGUUucaggguugugauuuugccccaucaggagcuaaCUAUACAACCUACUGCCUUCCcug
(((((.(((((((((((((((((((((...((.((.((((........)))).)).))))))))))))))))))))))))))))

Structure

     U                     uca  g  g    uuu 
caggg GAGGUAGUAGGUUGUGUGGUU   gg uu ugau   g
||||| |||||||||||||||||||||   || || ||||    
gucCC UUCCGUCAUCCAACAUAUCaa   uc ag acua   c
     -                     ---  g  g    ccc 

Annotation confidence High

Comments

This Fugu miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

ref|NC_042302.1|: 8022200-8022283 [-]

Mature fru-let-7b-5p

• Accession: MIMAT0003016
• Description: Fugu rubripes fru-let-7b-5p mature miRNA
• Sequence: 6 - UGAGGUAGUAGGUUGUGUGGUU - 27
• Evidence: not_experimental

Mature fru-let-7b-3p

• Accession: MIMAT0052876
• Description: Fugu rubripes fru-let-7b-3p mature miRNA
• Sequence: 61 - CUAUACAACCUACUGCCUUCC - 81
• Evidence: not_experimental

References