Stem-loop tni-let-7b

Accession

MI0003345

Description

Tetraodon nigroviridis tni-let-7b precursor miRNA

Sequence

3170963 reads, 116013.0 reads per million, 3 experiments

cagggUGAGGUAGUAGGUUGUGUGGUUucaggguugugauuuugccccaucaggagcuaaCUAUACAACCUACUGCCUUCCcug
(((((.(((((((((((((((((((((...((.((.((((........)))).)).))))))))))))))))))))))))))))

Structure

     U                     uca  g  g    uuu 
caggg GAGGUAGUAGGUUGUGUGGUU   gg uu ugau   g
||||| |||||||||||||||||||||   || || ||||    
gucCC UUCCGUCAUCCAACAUAUCaa   uc ag acua   c
     -                     ---  g  g    ccc 

Annotation confidence High

Comments

This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).

Genome context

19: 5327497-5327580 [-]

Mature tni-let-7b-5p

• Accession: MIMAT0003017
• Description: Tetraodon nigroviridis tni-let-7b-5p mature miRNA
• Sequence: 6 - UGAGGUAGUAGGUUGUGUGGUU - 27
• Evidence: not_experimental

Mature tni-let-7b-3p

• Accession: MIMAT0052956
• Description: Tetraodon nigroviridis tni-let-7b-3p mature miRNA
• Sequence: 61 - CUAUACAACCUACUGCCUUCC - 81
• Evidence: not_experimental

References